Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SH3TC1Q8TE82 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SH3TC1Q8TE82 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.82■■□□□ 1.08
SH3TC1Q8TE82 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3TC1Q8TE82 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.82■■□□□ 1.08
SH3TC1Q8TE82 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3TC1Q8TE82 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3TC1Q8TE82 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 MAL2-202ENST00000531508 892 ntTSL 3 BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 AL513190.1-201ENST00000621254 727 ntBASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3TC1Q8TE82 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 AP006288.1-201ENST00000446065 395 ntBASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 ALG1L5P-201ENST00000482043 771 ntBASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 YBX1P5-201ENST00000509441 847 ntBASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 AC005829.1-201ENST00000570002 483 ntBASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 PMS2P2-201ENST00000425039 1128 ntBASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC21.8■■□□□ 1.08
SH3TC1Q8TE82 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 RNF165-205ENST00000588679 2904 ntBASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 OR7E47P-204ENST00000575924 449 ntBASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 GGTLC5P-201ENST00000617623 998 ntBASIC21.79■■□□□ 1.08
SH3TC1Q8TE82 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3TC1Q8TE82 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms