Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TRAF3IP1Q8TDR0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 FER1L4-210ENST00000615531 5998 ntBASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAF3IP1Q8TDR0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 TSPY22P-201ENST00000427496 604 ntBASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 AL645608.8-201ENST00000606034 2086 ntBASIC18.34■□□□□ 0.53
TRAF3IP1Q8TDR0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.33■□□□□ 0.53
TRAF3IP1Q8TDR0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAF3IP1Q8TDR0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms