Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 AC104819.1-201ENST00000504587 486 ntBASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 AP000867.3-201ENST00000524675 377 ntBASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 AC009533.2-201ENST00000543664 586 ntBASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 NSUN5P1-202ENST00000421140 1535 ntBASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 NSUN5P2-203ENST00000457352 1529 ntBASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HMGCLL1Q8TB92 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 NUS1P1-201ENST00000446295 882 ntBASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 AC074051.2-201ENST00000565115 352 ntBASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HMGCLL1Q8TB92 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.22■□□□□ 0.35
HMGCLL1Q8TB92 HLA-J-201ENST00000462773 1622 ntBASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 AL118508.1-201ENST00000613502 2345 ntBASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 POM121L3P-201ENST00000419331 1163 ntBASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HMGCLL1Q8TB92 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms