Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 IGHV3-22-201ENST00000520721 359 ntBASIC20.77■□□□□ 0.92
NKX2-3Q8TAU0 SART3-203ENST00000546611 1184 ntBASIC20.77■□□□□ 0.92
NKX2-3Q8TAU0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.92
NKX2-3Q8TAU0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-3Q8TAU0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.77■□□□□ 0.92
NKX2-3Q8TAU0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-3Q8TAU0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NKX2-3Q8TAU0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
NKX2-3Q8TAU0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NKX2-3Q8TAU0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 HNRNPDP1-201ENST00000439535 754 ntBASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 BX276092.7-203ENST00000637198 1536 ntBASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NKX2-3Q8TAU0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.75■□□□□ 0.91
NKX2-3Q8TAU0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 FZD10-202ENST00000539839 3282 ntBASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 KRT18P3-201ENST00000451602 1288 ntBASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 MTDHP3-201ENST00000594186 672 ntBASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 AC134684.3-201ENST00000641758 218 ntBASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.74■□□□□ 0.91
NKX2-3Q8TAU0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 HTR5BP-201ENST00000430851 1154 ntBASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NKX2-3Q8TAU0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms