Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 AC073592.5-201ENST00000624854 528 ntBASIC18.8■□□□□ 0.6
LMO3Q8TAP4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LMO3Q8TAP4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LMO3Q8TAP4 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 AC093525.9-201ENST00000624961 1746 ntBASIC18.78■□□□□ 0.6
LMO3Q8TAP4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.78■□□□□ 0.6
LMO3Q8TAP4 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 AL135999.2-201ENST00000622438 1686 ntBASIC18.78■□□□□ 0.6
LMO3Q8TAP4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 AIRN-201ENST00000601203 4374 ntBASIC18.78■□□□□ 0.6
LMO3Q8TAP4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 PCDHA12-202ENST00000613593 2588 ntBASIC18.78■□□□□ 0.6
LMO3Q8TAP4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LMO3Q8TAP4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.77■□□□□ 0.6
LMO3Q8TAP4 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMO3Q8TAP4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LMO3Q8TAP4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMO3Q8TAP4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMO3Q8TAP4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LMO3Q8TAP4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LMO3Q8TAP4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms