Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SNIP1Q8TAD8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 AC116562.4-201ENST00000641316 2276 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 AP000974.1-201ENST00000623909 2387 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 FAM86GP-201ENST00000448322 971 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 AC023141.5-201ENST00000458585 616 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 RNA5SP421-201ENST00000516864 134 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 AL035252.4-201ENST00000624174 288 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 Z92544.3-201ENST00000624747 417 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 AC007064.4-201ENST00000637740 555 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 AF228730.6-201ENST00000641497 218 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 AC084121.3-201ENST00000641716 218 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 AC105233.6-201ENST00000642093 218 ntBASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SNIP1Q8TAD8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 AC063926.2-201ENST00000623766 1308 ntBASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 COX5BP2-201ENST00000392354 334 ntBASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 AC005034.1-201ENST00000426657 489 ntBASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 AC069262.1-201ENST00000539058 672 ntBASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 AC015911.4-201ENST00000588022 1070 ntBASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 AC092902.6-201ENST00000641783 218 ntBASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 AC025580.3-201ENST00000617932 1424 ntBASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SNIP1Q8TAD8 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms