Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
BEST2Q8NFU1 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 PRYP5-201ENST00000451909 266 ntBASIC18.9■□□□□ 0.62
BEST2Q8NFU1 AC093909.1-201ENST00000504731 1122 ntBASIC18.9■□□□□ 0.62
BEST2Q8NFU1 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 AC025062.2-201ENST00000605477 670 ntBASIC18.9■□□□□ 0.62
BEST2Q8NFU1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 AC012317.2-201ENST00000623305 2251 ntBASIC18.9■□□□□ 0.62
BEST2Q8NFU1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
BEST2Q8NFU1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
BEST2Q8NFU1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.89■□□□□ 0.62
BEST2Q8NFU1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.62
BEST2Q8NFU1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
BEST2Q8NFU1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
BEST2Q8NFU1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
BEST2Q8NFU1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
BEST2Q8NFU1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
BEST2Q8NFU1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 RPS2P1-201ENST00000434010 821 ntBASIC18.89■□□□□ 0.61
BEST2Q8NFU1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 SIGLEC30P-201ENST00000455569 941 ntBASIC18.89■□□□□ 0.61
BEST2Q8NFU1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 OR7E14P-202ENST00000530490 1290 ntBASIC18.89■□□□□ 0.61
BEST2Q8NFU1 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 FAM215A-202ENST00000632077 792 ntBASIC18.89■□□□□ 0.61
BEST2Q8NFU1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.89■□□□□ 0.61
BEST2Q8NFU1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 AC004817.3-201ENST00000602957 2129 ntBASIC18.88■□□□□ 0.61
BEST2Q8NFU1 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 HNRNPDP1-201ENST00000439535 754 ntBASIC18.88■□□□□ 0.61
BEST2Q8NFU1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BEST2Q8NFU1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms