Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 IGHV3-47-201ENST00000425060 335 ntBASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 AC074051.2-201ENST00000565115 352 ntBASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 AC111152.3-201ENST00000569699 673 ntBASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 AP005901.3-202ENST00000581653 237 ntBASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 LINC00896-202ENST00000609602 2128 ntBASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SRFBP1Q8NEF9 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 AC092119.3-201ENST00000612618 583 ntBASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 AL138688.1-201ENST00000624851 1594 ntBASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 TP73-AS1-210ENST00000637775 1455 ntBASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRFBP1Q8NEF9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 AC091607.1-201ENST00000490318 1060 ntBASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRFBP1Q8NEF9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms