Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TMEM35BQ8NCS4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 AL023806.1-201ENST00000603994 1649 ntBASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 SIRPAP1-201ENST00000448467 1770 ntBASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 IGHV3-47-201ENST00000425060 335 ntBASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 AC074051.2-201ENST00000565115 352 ntBASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 AC109462.3-201ENST00000573934 613 ntBASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 AC092329.2-201ENST00000598402 547 ntBASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 AC092119.3-201ENST00000612618 583 ntBASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 TP73-AS1-210ENST00000637775 1455 ntBASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TMEM35BQ8NCS4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 AL645608.8-201ENST00000606034 2086 ntBASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 CROCCP2-202ENST00000412962 2773 ntBASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 AC104819.1-201ENST00000504587 486 ntBASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 AP000867.3-201ENST00000524675 377 ntBASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 AC093458.2-201ENST00000623150 629 ntBASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM35BQ8NCS4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 AL049757.1-201ENST00000616842 1596 ntBASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 AC012615.1-201ENST00000565797 1299 ntBASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 AC111152.3-201ENST00000569699 673 ntBASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TMEM35BQ8NCS4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TMEM35BQ8NCS4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms