Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 AC133963.1-201ENST00000504166 1679 ntBASIC19.26■□□□□ 0.67
RDH13Q8NBN7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RDH13Q8NBN7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 FOSL1P1-201ENST00000511041 816 ntBASIC19.25■□□□□ 0.67
RDH13Q8NBN7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 MIR3652-201ENST00000579335 131 ntBASIC19.25■□□□□ 0.67
RDH13Q8NBN7 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 HLA-J-201ENST00000462773 1622 ntBASIC19.25■□□□□ 0.67
RDH13Q8NBN7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RDH13Q8NBN7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 LINC01451-201ENST00000623792 534 ntBASIC19.24■□□□□ 0.67
RDH13Q8NBN7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RDH13Q8NBN7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.23■□□□□ 0.67
RDH13Q8NBN7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.23■□□□□ 0.67
RDH13Q8NBN7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RDH13Q8NBN7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RDH13Q8NBN7 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RDH13Q8NBN7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RDH13Q8NBN7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms