Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LINC00896-202ENST00000609602 2128 ntBASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 AP001005.1-201ENST00000571755 1248 ntBASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 GPALPP1-207ENST00000611650 899 ntBASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 BX640515.1-201ENST00000617215 977 ntBASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC33Q8N5R6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 KRT18P55-202ENST00000578578 1546 ntBASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 AC113404.2-201ENST00000507884 177 ntBASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 AC064862.7-201ENST00000604520 867 ntBASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 AC006116.8-202ENST00000587620 1550 ntBASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC33Q8N5R6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC33Q8N5R6 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
CCDC33Q8N5R6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 AC132008.2-207ENST00000454517 770 ntBASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 DUTP2-201ENST00000519164 463 ntBASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 AC148477.8-201ENST00000624298 468 ntBASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 AF228730.7-201ENST00000641842 219 ntBASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
CCDC33Q8N5R6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms