Protein–RNA interactions for Protein: Q8IZU3

SYCP3, Synaptonemal complex protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3Q8IZU3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 FAM220CP-201ENST00000395253 831 ntBASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 MIR3652-201ENST00000579335 131 ntBASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 LINC00896-202ENST00000609602 2128 ntBASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.42■□□□□ 0.7
SYCP3Q8IZU3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 AC133963.1-201ENST00000504166 1679 ntBASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 LINC00304-203ENST00000565008 1864 ntBASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SYCP3Q8IZU3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 BNIP3P18-201ENST00000593976 575 ntBASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 AC138894.3-201ENST00000603787 634 ntBASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.4■□□□□ 0.7
SYCP3Q8IZU3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms