Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 FAM8A3P-201ENST00000427218 844 ntBASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 STK19B-204ENST00000512515 211 ntBASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 KRT19P2-202ENST00000557173 1012 ntBASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 AC027612.4-201ENST00000605371 583 ntBASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEFF1Q8IYR6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 AC009113.1-201ENST00000570267 2443 ntBASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 MIR770-201ENST00000390219 98 ntBASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 FAM58CP-201ENST00000435741 640 ntBASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 AC096734.2-201ENST00000562054 433 ntBASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 AC093028.1-201ENST00000622998 982 ntBASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEFF1Q8IYR6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 AC025580.3-201ENST00000617932 1424 ntBASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TMEFF1Q8IYR6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEFF1Q8IYR6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms