Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SCN4BQ8IWT1 NEFHP1-201ENST00000412845 2629 ntBASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 AL020989.1-201ENST00000422979 469 ntBASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 AC116407.3-201ENST00000623905 1129 ntBASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCN4BQ8IWT1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 AF228730.7-201ENST00000641842 219 ntBASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.53■□□□□ 0.56
SCN4BQ8IWT1 HLA-J-201ENST00000462773 1622 ntBASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 AC092910.1-201ENST00000482027 1129 ntBASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.52■□□□□ 0.56
SCN4BQ8IWT1 SLC25A1P1-201ENST00000528351 927 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms