Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 PVRIG2P-201ENST00000435460 978 ntBASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 AC113404.2-201ENST00000507884 177 ntBASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 KRT8P47-201ENST00000604727 1398 ntBASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.49■□□□□ 0.39
NUDCD3Q8IVD9 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 KRT18P65-201ENST00000439811 1286 ntBASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 FITM1-202ENST00000559294 800 ntBASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 C2orf69P3-201ENST00000565542 1120 ntBASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NUDCD3Q8IVD9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 AL390955.1-201ENST00000428694 934 ntBASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 AC009947.2-201ENST00000444014 672 ntBASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.47■□□□□ 0.39
NUDCD3Q8IVD9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms