Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC9.52□□□□□ -0.88
LCA10Q71F78 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
LCA10Q71F78 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
LCA10Q71F78 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC9.52□□□□□ -0.88
LCA10Q71F78 AC106886.4-201ENST00000623557 2502 ntBASIC9.52□□□□□ -0.88
LCA10Q71F78 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC9.52□□□□□ -0.88
LCA10Q71F78 CRK-204ENST00000574295 1391 ntTSL 5 BASIC9.52□□□□□ -0.88
LCA10Q71F78 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
LCA10Q71F78 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
LCA10Q71F78 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 IRX1P1-201ENST00000438849 1838 ntBASIC9.52□□□□□ -0.89
LCA10Q71F78 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC9.52□□□□□ -0.89
LCA10Q71F78 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LCA10Q71F78 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC9.52□□□□□ -0.89
LCA10Q71F78 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 MFF-205ENST00000354503 1085 ntTSL 2 BASIC9.52□□□□□ -0.89
LCA10Q71F78 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC9.52□□□□□ -0.89
LCA10Q71F78 RER1-204ENST00000378518 522 ntTSL 3 BASIC9.52□□□□□ -0.89
LCA10Q71F78 SDHAP1-207ENST00000440850 2000 ntBASIC9.52□□□□□ -0.89
LCA10Q71F78 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 HES2-206ENST00000489730 730 ntTSL 2 BASIC9.52□□□□□ -0.89
LCA10Q71F78 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
LCA10Q71F78 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
LCA10Q71F78 AC133552.2-202ENST00000575694 574 ntBASIC9.52□□□□□ -0.89
LCA10Q71F78 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC9.52□□□□□ -0.89
LCA10Q71F78 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
LCA10Q71F78 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
LCA10Q71F78 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
LCA10Q71F78 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC9.52□□□□□ -0.89
LCA10Q71F78 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC9.52□□□□□ -0.89
LCA10Q71F78 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC9.52□□□□□ -0.89
LCA10Q71F78 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC9.52□□□□□ -0.89
LCA10Q71F78 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
LCA10Q71F78 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 AL359183.1-201ENST00000623796 2132 ntBASIC9.52□□□□□ -0.89
LCA10Q71F78 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
LCA10Q71F78 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
LCA10Q71F78 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC9.52□□□□□ -0.89
LCA10Q71F78 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC9.51□□□□□ -0.89
LCA10Q71F78 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC9.51□□□□□ -0.89
LCA10Q71F78 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC9.51□□□□□ -0.89
LCA10Q71F78 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC9.51□□□□□ -0.89
LCA10Q71F78 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC9.51□□□□□ -0.89
LCA10Q71F78 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC9.51□□□□□ -0.89
LCA10Q71F78 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
LCA10Q71F78 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC9.51□□□□□ -0.89
LCA10Q71F78 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC9.51□□□□□ -0.89
LCA10Q71F78 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC9.51□□□□□ -0.89
LCA10Q71F78 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC9.51□□□□□ -0.89
LCA10Q71F78 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 HARS-201ENST00000307633 1780 ntTSL 2 BASIC9.51□□□□□ -0.89
LCA10Q71F78 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 AC104417.2-201ENST00000562989 1793 ntBASIC9.51□□□□□ -0.89
LCA10Q71F78 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
LCA10Q71F78 GGT1-206ENST00000404223 952 ntTSL 2 BASIC9.51□□□□□ -0.89
LCA10Q71F78 BX276092.2-201ENST00000417668 665 ntBASIC9.51□□□□□ -0.89
LCA10Q71F78 AC073210.2-201ENST00000430369 194 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms