Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS13CQ709C8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.52□□□□□ -0.09
VPS13CQ709C8 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.52□□□□□ -0.09
VPS13CQ709C8 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13CQ709C8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
VPS13CQ709C8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS13CQ709C8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13CQ709C8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13CQ709C8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13CQ709C8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13CQ709C8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VPS13CQ709C8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.52□□□□□ -0.09
VPS13CQ709C8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.52□□□□□ -0.09
VPS13CQ709C8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.52□□□□□ -0.09
VPS13CQ709C8 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.52□□□□□ -0.09
VPS13CQ709C8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 MIR943-201ENST00000401286 94 ntBASIC14.51□□□□□ -0.09
VPS13CQ709C8 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.51□□□□□ -0.09
VPS13CQ709C8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 CRB3P1-201ENST00000449338 276 ntBASIC14.51□□□□□ -0.09
VPS13CQ709C8 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 AL031598.1-201ENST00000561511 1773 ntBASIC14.51□□□□□ -0.09
VPS13CQ709C8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VPS13CQ709C8 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VPS13CQ709C8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 AC073592.3-201ENST00000625118 1834 ntBASIC14.5□□□□□ -0.09
VPS13CQ709C8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 AL135744.1-201ENST00000565098 629 ntBASIC14.5□□□□□ -0.09
VPS13CQ709C8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 AP000974.1-201ENST00000623909 2387 ntBASIC14.5□□□□□ -0.09
VPS13CQ709C8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 AC098818.2-201ENST00000564925 2320 ntBASIC14.5□□□□□ -0.09
VPS13CQ709C8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 REXO1L11P-201ENST00000620964 1927 ntBASIC14.5□□□□□ -0.09
VPS13CQ709C8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 STK25P1-201ENST00000585406 838 ntBASIC14.5□□□□□ -0.09
VPS13CQ709C8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
VPS13CQ709C8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 AL512356.2-201ENST00000546955 174 ntBASIC14.5□□□□□ -0.09
VPS13CQ709C8 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.5□□□□□ -0.09
VPS13CQ709C8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
VPS13CQ709C8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 TERF1P3-201ENST00000505638 1227 ntBASIC14.49□□□□□ -0.09
VPS13CQ709C8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.49□□□□□ -0.09
VPS13CQ709C8 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms