Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 ESRRAP1-201ENST00000400596 1257 ntBASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 CYP2T1P-202ENST00000641596 2535 ntBASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 CICP13-201ENST00000422015 2789 ntBASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 KRT18P29-201ENST00000397031 1267 ntBASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TMEM88Q6PEY1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 UNC93B5-201ENST00000530315 699 ntBASIC14.23□□□□□ -0.13
TMEM88Q6PEY1 PNMA6B-201ENST00000538162 1200 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms