Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 AL020989.1-201ENST00000422979 469 ntBASIC20.86■□□□□ 0.93
CTR9Q6PD62 SLC25A6P5-201ENST00000435663 894 ntBASIC20.86■□□□□ 0.93
CTR9Q6PD62 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 AC012640.2-201ENST00000561606 901 ntBASIC20.86■□□□□ 0.93
CTR9Q6PD62 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 AL022326.1-202ENST00000641533 845 ntBASIC20.86■□□□□ 0.93
CTR9Q6PD62 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CTR9Q6PD62 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CTR9Q6PD62 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.85■□□□□ 0.93
CTR9Q6PD62 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.85■□□□□ 0.93
CTR9Q6PD62 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CTR9Q6PD62 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 OR7E14P-202ENST00000530490 1290 ntBASIC20.85■□□□□ 0.93
CTR9Q6PD62 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CTR9Q6PD62 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.85■□□□□ 0.93
CTR9Q6PD62 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.85■□□□□ 0.93
CTR9Q6PD62 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.85■□□□□ 0.93
CTR9Q6PD62 BX640515.1-201ENST00000617215 977 ntBASIC20.85■□□□□ 0.93
CTR9Q6PD62 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.85■□□□□ 0.93
CTR9Q6PD62 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.85■□□□□ 0.93
CTR9Q6PD62 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CTR9Q6PD62 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CTR9Q6PD62 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CTR9Q6PD62 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 AC003669.1-201ENST00000334569 611 ntBASIC20.84■□□□□ 0.93
CTR9Q6PD62 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 AL590627.1-203ENST00000421194 1026 ntBASIC20.84■□□□□ 0.93
CTR9Q6PD62 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 IGHV3-52-201ENST00000519770 353 ntBASIC20.84■□□□□ 0.93
CTR9Q6PD62 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 AC107918.4-202ENST00000641623 219 ntBASIC20.84■□□□□ 0.93
CTR9Q6PD62 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 AC008764.6-201ENST00000595909 2069 ntBASIC20.84■□□□□ 0.93
CTR9Q6PD62 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CTR9Q6PD62 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 AC007613.1-201ENST00000572811 2597 ntBASIC20.84■□□□□ 0.93
CTR9Q6PD62 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CTR9Q6PD62 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTR9Q6PD62 IL9RP2-201ENST00000423948 1312 ntBASIC20.83■□□□□ 0.93
CTR9Q6PD62 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTR9Q6PD62 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CTR9Q6PD62 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms