Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 AL359075.1-203ENST00000462729 1002 ntBASIC17.97■□□□□ 0.47
CASC4Q6P4E1 AC112698.1-201ENST00000510299 916 ntBASIC17.97■□□□□ 0.47
CASC4Q6P4E1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 AC012306.2-201ENST00000609350 630 ntBASIC17.97■□□□□ 0.47
CASC4Q6P4E1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CASC4Q6P4E1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CASC4Q6P4E1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 IGHGP-201ENST00000390555 1178 ntBASIC17.95■□□□□ 0.46
CASC4Q6P4E1 RNF152P1-201ENST00000397754 604 ntBASIC17.95■□□□□ 0.46
CASC4Q6P4E1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 TSPY5P-201ENST00000426936 936 ntBASIC17.95■□□□□ 0.46
CASC4Q6P4E1 AC092647.4-201ENST00000457211 535 ntBASIC17.95■□□□□ 0.46
CASC4Q6P4E1 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.95■□□□□ 0.46
CASC4Q6P4E1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 AP001094.4-201ENST00000579008 2176 ntBASIC17.95■□□□□ 0.46
CASC4Q6P4E1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CASC4Q6P4E1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 AL353692.3-201ENST00000407031 1396 ntBASIC17.94■□□□□ 0.46
CASC4Q6P4E1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 HOMER2P1-201ENST00000455653 964 ntBASIC17.94■□□□□ 0.46
CASC4Q6P4E1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CASC4Q6P4E1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms