Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 LINC00628-201ENST00000628516 1289 ntBASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD4Q5XG99 AC006116.8-202ENST00000587620 1550 ntBASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 FAM185BP-201ENST00000443595 716 ntBASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 PAWRP1-201ENST00000451083 565 ntBASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 AC109322.1-201ENST00000524499 1264 ntBASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LYSMD4Q5XG99 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LYSMD4Q5XG99 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
LYSMD4Q5XG99 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
LYSMD4Q5XG99 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 AL590787.1-201ENST00000568856 1315 ntBASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 AC092919.2-201ENST00000623631 1645 ntBASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LYSMD4Q5XG99 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.13■□□□□ 0.33
LYSMD4Q5XG99 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.12■□□□□ 0.33
LYSMD4Q5XG99 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.12■□□□□ 0.33
LYSMD4Q5XG99 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD4Q5XG99 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD4Q5XG99 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LYSMD4Q5XG99 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LYSMD4Q5XG99 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms