Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 AC004449.1-201ENST00000564240 433 ntBASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CDC42BPAQ5VT25 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 CD99-202ENST00000381180 530 ntTSL 2 BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 AC093214.1-201ENST00000511688 1107 ntBASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
CDC42BPAQ5VT25 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC26.29■■□□□ 1.8
CDC42BPAQ5VT25 AL138781.2-201ENST00000617896 1843 ntBASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 MIR661-201ENST00000384842 89 ntBASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 AQP6-203ENST00000551733 849 ntTSL 3 BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 RARRES2P8-201ENST00000566335 367 ntBASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 BX323043.1-201ENST00000641006 1765 ntBASIC26.28■■□□□ 1.8
CDC42BPAQ5VT25 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 PTMS-202ENST00000389462 773 ntTSL 2 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 FAM58DP-201ENST00000428076 619 ntBASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 RN7SL589P-201ENST00000481268 310 ntBASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 AC069335.1-201ENST00000489972 472 ntBASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 AC067863.1-201ENST00000494933 530 ntBASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 VPS29-207ENST00000549970 818 ntTSL 3 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
CDC42BPAQ5VT25 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC26.26■■□□□ 1.8
CDC42BPAQ5VT25 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 AC138028.4-201ENST00000564984 1845 ntBASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CDC42BPAQ5VT25 SLC25A1P3-201ENST00000395415 828 ntBASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms