Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.7□□□□□ -0.54
VPS13DQ5THJ4 AC002558.1-201ENST00000488906 803 ntBASIC11.7□□□□□ -0.54
VPS13DQ5THJ4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
VPS13DQ5THJ4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
VPS13DQ5THJ4 AP001059.3-201ENST00000619053 235 ntBASIC11.7□□□□□ -0.54
VPS13DQ5THJ4 AC007064.4-201ENST00000637740 555 ntBASIC11.7□□□□□ -0.54
VPS13DQ5THJ4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 PI4KAP1-204ENST00000612579 1703 ntBASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 SERBP1P5-201ENST00000510079 1181 ntBASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 AC109635.5-201ENST00000533593 962 ntBASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 REXO1L9P-201ENST00000604264 2108 ntBASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 AC236430.1-201ENST00000402231 743 ntBASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 HMGA1P7-201ENST00000406908 502 ntBASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 AL355306.1-201ENST00000415580 579 ntBASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 KRT18P32-201ENST00000424695 1287 ntBASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 AP000842.3-202ENST00000569238 1080 ntBASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC11.69□□□□□ -0.54
VPS13DQ5THJ4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 AL592309.1-201ENST00000443127 649 ntBASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 SPDYE11-202ENST00000450699 704 ntBASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 SPDYE9P-201ENST00000570642 692 ntBASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 SPDYE10P-202ENST00000612005 668 ntBASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 SPDYE8P-202ENST00000612377 668 ntBASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 HLA-DQB1-201ENST00000374943 1656 ntBASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
VPS13DQ5THJ4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms