Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 MYCLP1-201ENST00000372451 1075 ntBASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 AC114341.1-201ENST00000618070 349 ntBASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 AC080080.1-201ENST00000625121 2420 ntBASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 AC012313.1-201ENST00000593393 3059 ntBASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTSL3PQ5NE16 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 STK25P1-201ENST00000585406 838 ntBASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 AD001527.2-201ENST00000622994 785 ntBASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 AP001094.4-201ENST00000579008 2176 ntBASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 AC016396.2-201ENST00000562575 1417 ntBASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSL3PQ5NE16 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 AC111152.3-201ENST00000569699 673 ntBASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 AC099336.1-202ENST00000602961 463 ntBASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSL3PQ5NE16 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTSL3PQ5NE16 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms