Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
TMEM35AQ53FP2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35AQ53FP2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35AQ53FP2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TMEM35AQ53FP2 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 KRT8P10-201ENST00000450021 1447 ntBASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 AC026471.1-201ENST00000564629 3026 ntBASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TMEM35AQ53FP2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.71■□□□□ 0.26
TMEM35AQ53FP2 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 HCG4P8-203ENST00000443049 980 ntBASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 NUS1P1-201ENST00000446295 882 ntBASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 KRT16P4-201ENST00000453883 522 ntBASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 STK25P1-201ENST00000585406 838 ntBASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 AD001527.2-201ENST00000622994 785 ntBASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 AL023806.1-201ENST00000603994 1649 ntBASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TMEM35AQ53FP2 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 MIR3652-201ENST00000579335 131 ntBASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 MIR5100-201ENST00000579544 119 ntBASIC16.69■□□□□ 0.26
TMEM35AQ53FP2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms