Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 DBET-201ENST00000630918 3363 ntBASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 AC092364.2-201ENST00000596710 2692 ntBASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 ID1-201ENST00000376105 1233 ntBASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 AC069152.1-201ENST00000438030 544 ntBASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ERCC6LQ2NKX8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERCC6LQ2NKX8 AC092053.1-201ENST00000605787 1936 ntBASIC18.64■□□□□ 0.58
ERCC6LQ2NKX8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERCC6LQ2NKX8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ERCC6LQ2NKX8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.64■□□□□ 0.58
ERCC6LQ2NKX8 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 AC004951.3-201ENST00000418645 1148 ntBASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 POM121L13P-201ENST00000422362 380 ntBASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 UNC93B4-201ENST00000505679 747 ntBASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 AC142086.2-201ENST00000569753 217 ntBASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.64■□□□□ 0.57
ERCC6LQ2NKX8 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 AC098934.4-201ENST00000564127 592 ntBASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.63■□□□□ 0.57
ERCC6LQ2NKX8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms