Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RFX7Q2KHR2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 AC104109.2-201ENST00000602919 1418 ntBASIC21.18■□□□□ 0.98
RFX7Q2KHR2 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 KLF4P1-201ENST00000412782 1185 ntBASIC21.18■□□□□ 0.98
RFX7Q2KHR2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 AC139530.3-201ENST00000620344 690 ntBASIC21.18■□□□□ 0.98
RFX7Q2KHR2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 AC132938.5-201ENST00000624980 1813 ntBASIC21.18■□□□□ 0.98
RFX7Q2KHR2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC21.18■□□□□ 0.98
RFX7Q2KHR2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 KRT18P13-201ENST00000400056 1290 ntBASIC21.17■□□□□ 0.98
RFX7Q2KHR2 SPDYE21P-201ENST00000413323 827 ntBASIC21.17■□□□□ 0.98
RFX7Q2KHR2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 AP002414.3-201ENST00000589352 1468 ntBASIC21.17■□□□□ 0.98
RFX7Q2KHR2 AC009336.1-201ENST00000608941 1553 ntBASIC21.17■□□□□ 0.98
RFX7Q2KHR2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RFX7Q2KHR2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 RPS2P28-201ENST00000314255 741 ntBASIC21.16■□□□□ 0.98
RFX7Q2KHR2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 BX005266.1-201ENST00000473402 457 ntBASIC21.16■□□□□ 0.98
RFX7Q2KHR2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 Z83851.2-201ENST00000609564 659 ntBASIC21.16■□□□□ 0.98
RFX7Q2KHR2 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 AC073592.5-201ENST00000624854 528 ntBASIC21.16■□□□□ 0.98
RFX7Q2KHR2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RFX7Q2KHR2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.15■□□□□ 0.98
RFX7Q2KHR2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms