Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAE1P78406 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.67■□□□□ 0.26
RAE1P78406 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAE1P78406 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.67■□□□□ 0.26
RAE1P78406 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAE1P78406 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.67■□□□□ 0.26
RAE1P78406 FAM220CP-201ENST00000395253 831 ntBASIC16.67■□□□□ 0.26
RAE1P78406 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
RAE1P78406 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.67■□□□□ 0.26
RAE1P78406 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.67■□□□□ 0.26
RAE1P78406 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.67■□□□□ 0.26
RAE1P78406 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.67■□□□□ 0.26
RAE1P78406 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAE1P78406 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAE1P78406 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAE1P78406 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAE1P78406 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAE1P78406 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.67■□□□□ 0.26
RAE1P78406 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAE1P78406 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.67■□□□□ 0.26
RAE1P78406 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.67■□□□□ 0.26
RAE1P78406 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAE1P78406 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAE1P78406 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.66■□□□□ 0.26
RAE1P78406 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 AC233702.3-201ENST00000578656 1387 ntBASIC16.66■□□□□ 0.26
RAE1P78406 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAE1P78406 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.66■□□□□ 0.26
RAE1P78406 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.66■□□□□ 0.26
RAE1P78406 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 MYCLP1-201ENST00000372451 1075 ntBASIC16.66■□□□□ 0.26
RAE1P78406 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.66■□□□□ 0.26
RAE1P78406 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.66■□□□□ 0.26
RAE1P78406 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 IGHV3-52-201ENST00000519770 353 ntBASIC16.66■□□□□ 0.26
RAE1P78406 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.66■□□□□ 0.26
RAE1P78406 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.66■□□□□ 0.26
RAE1P78406 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.66■□□□□ 0.26
RAE1P78406 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.66■□□□□ 0.26
RAE1P78406 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.66■□□□□ 0.26
RAE1P78406 TPSP2-201ENST00000561760 610 ntBASIC16.66■□□□□ 0.26
RAE1P78406 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.66■□□□□ 0.26
RAE1P78406 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RAE1P78406 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RAE1P78406 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RAE1P78406 KRT18P1-202ENST00000452408 1331 ntBASIC16.66■□□□□ 0.26
RAE1P78406 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.66■□□□□ 0.26
RAE1P78406 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RAE1P78406 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAE1P78406 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 IER3-202ENST00000376377 1350 ntBASIC16.65■□□□□ 0.26
RAE1P78406 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.65■□□□□ 0.26
RAE1P78406 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RAE1P78406 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.65■□□□□ 0.26
RAE1P78406 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
RAE1P78406 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.65■□□□□ 0.26
RAE1P78406 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.65■□□□□ 0.26
RAE1P78406 AC103564.2-201ENST00000432853 1299 ntBASIC16.65■□□□□ 0.26
RAE1P78406 DRAXINP1-201ENST00000437611 948 ntBASIC16.65■□□□□ 0.26
RAE1P78406 AC009533.2-201ENST00000543664 586 ntBASIC16.65■□□□□ 0.26
RAE1P78406 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RAE1P78406 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
RAE1P78406 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RAE1P78406 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RAE1P78406 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.65■□□□□ 0.26
RAE1P78406 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.65■□□□□ 0.26
RAE1P78406 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.65■□□□□ 0.26
RAE1P78406 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RAE1P78406 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAE1P78406 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.64■□□□□ 0.26
RAE1P78406 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RAE1P78406 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.64■□□□□ 0.26
RAE1P78406 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAE1P78406 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAE1P78406 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAE1P78406 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAE1P78406 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RAE1P78406 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms