Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 IGHV3-41-201ENST00000613121 348 ntBASIC17.75■□□□□ 0.43
PRAMEP78395 AC124864.1-201ENST00000623408 392 ntBASIC17.75■□□□□ 0.43
PRAMEP78395 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.75■□□□□ 0.43
PRAMEP78395 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PRAMEP78395 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEP78395 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRAMEP78395 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PRAMEP78395 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEP78395 AC005332.1-201ENST00000577698 1310 ntBASIC17.74■□□□□ 0.43
PRAMEP78395 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.74■□□□□ 0.43
PRAMEP78395 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.74■□□□□ 0.43
PRAMEP78395 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.74■□□□□ 0.43
PRAMEP78395 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PRAMEP78395 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PRAMEP78395 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.74■□□□□ 0.43
PRAMEP78395 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.74■□□□□ 0.43
PRAMEP78395 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.74■□□□□ 0.43
PRAMEP78395 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
PRAMEP78395 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEP78395 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEP78395 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEP78395 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEP78395 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.74■□□□□ 0.43
PRAMEP78395 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.74■□□□□ 0.43
PRAMEP78395 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRAMEP78395 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PRAMEP78395 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEP78395 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEP78395 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEP78395 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEP78395 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.73■□□□□ 0.43
PRAMEP78395 BX276092.5-203ENST00000456199 560 ntBASIC17.73■□□□□ 0.43
PRAMEP78395 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEP78395 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.73■□□□□ 0.43
PRAMEP78395 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEP78395 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEP78395 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEP78395 AL138688.1-201ENST00000624851 1594 ntBASIC17.73■□□□□ 0.43
PRAMEP78395 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.73■□□□□ 0.43
PRAMEP78395 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEP78395 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEP78395 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.73■□□□□ 0.43
PRAMEP78395 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRAMEP78395 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
PRAMEP78395 CROCCP1-201ENST00000426910 5675 ntBASIC17.73■□□□□ 0.43
PRAMEP78395 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
PRAMEP78395 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.73■□□□□ 0.43
PRAMEP78395 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEP78395 PP12613-201ENST00000424958 2230 ntBASIC17.72■□□□□ 0.43
PRAMEP78395 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.72■□□□□ 0.43
PRAMEP78395 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
PRAMEP78395 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEP78395 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 AC096633.1-201ENST00000422446 749 ntBASIC17.72■□□□□ 0.43
PRAMEP78395 RN7SL606P-201ENST00000472779 293 ntBASIC17.72■□□□□ 0.43
PRAMEP78395 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEP78395 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 AC011840.4-201ENST00000578471 627 ntBASIC17.72■□□□□ 0.43
PRAMEP78395 AL121672.3-201ENST00000608644 468 ntBASIC17.72■□□□□ 0.43
PRAMEP78395 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.72■□□□□ 0.43
PRAMEP78395 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
PRAMEP78395 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.72■□□□□ 0.43
PRAMEP78395 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
PRAMEP78395 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
PRAMEP78395 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRAMEP78395 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms