Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AL138831.2-201ENST00000606564 490 ntBASIC19.64■□□□□ 0.73
ASIC1P78348 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ASIC1P78348 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ASIC1P78348 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.64■□□□□ 0.73
ASIC1P78348 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.64■□□□□ 0.73
ASIC1P78348 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ASIC1P78348 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ASIC1P78348 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
ASIC1P78348 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ASIC1P78348 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ASIC1P78348 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ASIC1P78348 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.64■□□□□ 0.73
ASIC1P78348 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ASIC1P78348 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.64■□□□□ 0.73
ASIC1P78348 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ASIC1P78348 AC012313.1-201ENST00000593393 3059 ntBASIC19.64■□□□□ 0.73
ASIC1P78348 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ASIC1P78348 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ASIC1P78348 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ASIC1P78348 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
ASIC1P78348 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.63■□□□□ 0.73
ASIC1P78348 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 LYSMD4-203ENST00000378904 2122 ntBASIC19.63■□□□□ 0.73
ASIC1P78348 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.63■□□□□ 0.73
ASIC1P78348 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ASIC1P78348 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.63■□□□□ 0.73
ASIC1P78348 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 MIR1224-201ENST00000408193 85 ntBASIC19.63■□□□□ 0.73
ASIC1P78348 TSSC2-201ENST00000450217 709 ntBASIC19.63■□□□□ 0.73
ASIC1P78348 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.63■□□□□ 0.73
ASIC1P78348 KRT18P35-201ENST00000510488 1269 ntBASIC19.63■□□□□ 0.73
ASIC1P78348 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.63■□□□□ 0.73
ASIC1P78348 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.63■□□□□ 0.73
ASIC1P78348 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.63■□□□□ 0.73
ASIC1P78348 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ASIC1P78348 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.63■□□□□ 0.73
ASIC1P78348 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.63■□□□□ 0.73
ASIC1P78348 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.63■□□□□ 0.73
ASIC1P78348 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
ASIC1P78348 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ASIC1P78348 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.62■□□□□ 0.73
ASIC1P78348 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.62■□□□□ 0.73
ASIC1P78348 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ASIC1P78348 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ASIC1P78348 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ASIC1P78348 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.62■□□□□ 0.73
ASIC1P78348 KRT18P1-202ENST00000452408 1331 ntBASIC19.62■□□□□ 0.73
ASIC1P78348 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ASIC1P78348 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ASIC1P78348 VENTXP7-201ENST00000475503 772 ntBASIC19.62■□□□□ 0.73
ASIC1P78348 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.62■□□□□ 0.73
ASIC1P78348 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.62■□□□□ 0.73
ASIC1P78348 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.62■□□□□ 0.73
ASIC1P78348 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ASIC1P78348 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ASIC1P78348 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ASIC1P78348 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.62■□□□□ 0.73
ASIC1P78348 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.62■□□□□ 0.73
ASIC1P78348 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ASIC1P78348 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.62■□□□□ 0.73
ASIC1P78348 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ASIC1P78348 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ASIC1P78348 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ASIC1P78348 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ASIC1P78348 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ASIC1P78348 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ASIC1P78348 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ASIC1P78348 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ASIC1P78348 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ASIC1P78348 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.61■□□□□ 0.73
ASIC1P78348 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ASIC1P78348 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ASIC1P78348 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ASIC1P78348 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ASIC1P78348 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ASIC1P78348 AC246785.2-201ENST00000432512 513 ntBASIC19.61■□□□□ 0.73
ASIC1P78348 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.61■□□□□ 0.73
ASIC1P78348 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ASIC1P78348 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ASIC1P78348 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ASIC1P78348 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ASIC1P78348 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.61■□□□□ 0.73
ASIC1P78348 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ASIC1P78348 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
ASIC1P78348 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ASIC1P78348 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms