Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
CKS1BP61024 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS1BP61024 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CKS1BP61024 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CKS1BP61024 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.38□□□□□ -0.43
CKS1BP61024 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CKS1BP61024 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CKS1BP61024 KRT8P45-201ENST00000414328 1447 ntBASIC12.37□□□□□ -0.43
CKS1BP61024 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
CKS1BP61024 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CKS1BP61024 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 AC138028.4-201ENST00000564984 1845 ntBASIC12.37□□□□□ -0.43
CKS1BP61024 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CKS1BP61024 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC12.37□□□□□ -0.43
CKS1BP61024 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC12.37□□□□□ -0.43
CKS1BP61024 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CKS1BP61024 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC12.37□□□□□ -0.43
CKS1BP61024 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.37□□□□□ -0.43
CKS1BP61024 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.37□□□□□ -0.43
CKS1BP61024 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 AC100803.2-201ENST00000562459 1963 ntBASIC12.37□□□□□ -0.43
CKS1BP61024 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CKS1BP61024 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
CKS1BP61024 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CKS1BP61024 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CKS1BP61024 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CKS1BP61024 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CKS1BP61024 KRT8P11-201ENST00000409686 1436 ntBASIC12.37□□□□□ -0.43
CKS1BP61024 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS1BP61024 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS1BP61024 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.36□□□□□ -0.43
CKS1BP61024 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CKS1BP61024 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS1BP61024 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.36□□□□□ -0.43
CKS1BP61024 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
CKS1BP61024 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CKS1BP61024 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC12.36□□□□□ -0.43
CKS1BP61024 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CKS1BP61024 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS1BP61024 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS1BP61024 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS1BP61024 AC134043.2-201ENST00000624206 2238 ntBASIC12.36□□□□□ -0.43
CKS1BP61024 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS1BP61024 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CKS1BP61024 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CKS1BP61024 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
CKS1BP61024 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
CKS1BP61024 AC239809.2-201ENST00000415381 517 ntBASIC12.36□□□□□ -0.43
CKS1BP61024 DERL1-203ENST00000419562 918 ntTSL 2 BASIC12.36□□□□□ -0.43
CKS1BP61024 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.36□□□□□ -0.43
CKS1BP61024 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CKS1BP61024 KRT16P5-201ENST00000455284 522 ntBASIC12.36□□□□□ -0.43
CKS1BP61024 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
CKS1BP61024 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.36□□□□□ -0.43
CKS1BP61024 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC12.36□□□□□ -0.43
CKS1BP61024 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.36□□□□□ -0.43
CKS1BP61024 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.36□□□□□ -0.43
CKS1BP61024 AC098934.4-201ENST00000564127 592 ntBASIC12.36□□□□□ -0.43
CKS1BP61024 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms