Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CLDN2P57739 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.33■□□□□ 0.37
CLDN2P57739 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.33■□□□□ 0.37
CLDN2P57739 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN2P57739 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN2P57739 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN2P57739 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN2P57739 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CLDN2P57739 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN2P57739 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN2P57739 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN2P57739 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CLDN2P57739 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN2P57739 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.33■□□□□ 0.37
CLDN2P57739 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CLDN2P57739 KRT18P55-202ENST00000578578 1546 ntBASIC17.33■□□□□ 0.37
CLDN2P57739 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDN2P57739 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN2P57739 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CLDN2P57739 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLDN2P57739 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN2P57739 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN2P57739 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN2P57739 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDN2P57739 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLDN2P57739 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN2P57739 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLDN2P57739 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN2P57739 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDN2P57739 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN2P57739 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN2P57739 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN2P57739 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN2P57739 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CLDN2P57739 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDN2P57739 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN2P57739 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN2P57739 NCF1C-201ENST00000438382 1427 ntBASIC17.32■□□□□ 0.36
CLDN2P57739 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN2P57739 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN2P57739 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN2P57739 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN2P57739 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN2P57739 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 AC138028.4-201ENST00000564984 1845 ntBASIC17.32■□□□□ 0.36
CLDN2P57739 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN2P57739 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN2P57739 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN2P57739 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLDN2P57739 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLDN2P57739 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN2P57739 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN2P57739 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN2P57739 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN2P57739 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN2P57739 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.31■□□□□ 0.36
CLDN2P57739 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN2P57739 RNA5SP416-201ENST00000516838 111 ntBASIC17.31■□□□□ 0.36
CLDN2P57739 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 PGM5P2-202ENST00000637225 1043 ntBASIC17.31■□□□□ 0.36
CLDN2P57739 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 AC097637.2-201ENST00000624096 1997 ntBASIC17.31■□□□□ 0.36
CLDN2P57739 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN2P57739 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN2P57739 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN2P57739 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms