Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PMS1P54277 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PMS1P54277 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PMS1P54277 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PMS1P54277 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PMS1P54277 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PMS1P54277 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PMS1P54277 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PMS1P54277 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PMS1P54277 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PMS1P54277 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PMS1P54277 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PMS1P54277 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.33■□□□□ 0.68
PMS1P54277 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 AL121956.5-201ENST00000625261 221 ntBASIC19.33■□□□□ 0.68
PMS1P54277 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
PMS1P54277 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.33■□□□□ 0.68
PMS1P54277 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.33■□□□□ 0.68
PMS1P54277 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 AC016396.2-201ENST00000562575 1417 ntBASIC19.33■□□□□ 0.68
PMS1P54277 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PMS1P54277 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.32■□□□□ 0.68
PMS1P54277 AC016734.2-201ENST00000624325 1377 ntBASIC19.32■□□□□ 0.68
PMS1P54277 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PMS1P54277 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PMS1P54277 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PMS1P54277 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PMS1P54277 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.32■□□□□ 0.68
PMS1P54277 AC084018.2-201ENST00000613093 2607 ntBASIC19.32■□□□□ 0.68
PMS1P54277 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.32■□□□□ 0.68
PMS1P54277 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.32■□□□□ 0.68
PMS1P54277 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.32■□□□□ 0.68
PMS1P54277 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.32■□□□□ 0.68
PMS1P54277 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PMS1P54277 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.32■□□□□ 0.68
PMS1P54277 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.32■□□□□ 0.68
PMS1P54277 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.32■□□□□ 0.68
PMS1P54277 AL049597.2-201ENST00000565575 961 ntBASIC19.32■□□□□ 0.68
PMS1P54277 AC109462.3-201ENST00000573934 613 ntBASIC19.32■□□□□ 0.68
PMS1P54277 AC090616.6-201ENST00000582640 721 ntBASIC19.32■□□□□ 0.68
PMS1P54277 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PMS1P54277 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PMS1P54277 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PMS1P54277 AC046185.3-201ENST00000623228 1824 ntBASIC19.32■□□□□ 0.68
PMS1P54277 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PMS1P54277 AL049757.1-201ENST00000616842 1596 ntBASIC19.32■□□□□ 0.68
PMS1P54277 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PMS1P54277 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PMS1P54277 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PMS1P54277 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PMS1P54277 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PMS1P54277 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.31■□□□□ 0.68
PMS1P54277 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.31■□□□□ 0.68
PMS1P54277 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.31■□□□□ 0.68
PMS1P54277 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.31■□□□□ 0.68
PMS1P54277 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.31■□□□□ 0.68
PMS1P54277 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.31■□□□□ 0.68
PMS1P54277 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.31■□□□□ 0.68
PMS1P54277 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.31■□□□□ 0.68
PMS1P54277 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.31■□□□□ 0.68
PMS1P54277 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.31■□□□□ 0.68
PMS1P54277 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.31■□□□□ 0.68
PMS1P54277 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
PMS1P54277 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PMS1P54277 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
PMS1P54277 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms