Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC19.3■□□□□ 0.68
ATN1P54259 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATN1P54259 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
ATN1P54259 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ATN1P54259 AC002472.2-201ENST00000442739 958 ntBASIC19.29■□□□□ 0.68
ATN1P54259 AL513480.1-201ENST00000451731 511 ntBASIC19.29■□□□□ 0.68
ATN1P54259 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.29■□□□□ 0.68
ATN1P54259 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 TERF1P3-201ENST00000505638 1227 ntBASIC19.29■□□□□ 0.68
ATN1P54259 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.29■□□□□ 0.68
ATN1P54259 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.29■□□□□ 0.68
ATN1P54259 DUTP2-201ENST00000519164 463 ntBASIC19.29■□□□□ 0.68
ATN1P54259 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC19.29■□□□□ 0.68
ATN1P54259 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
ATN1P54259 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.29■□□□□ 0.68
ATN1P54259 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATN1P54259 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 AC100803.2-201ENST00000562459 1963 ntBASIC19.28■□□□□ 0.68
ATN1P54259 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
ATN1P54259 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
ATN1P54259 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ATN1P54259 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.28■□□□□ 0.68
ATN1P54259 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
ATN1P54259 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.28■□□□□ 0.68
ATN1P54259 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ATN1P54259 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.28■□□□□ 0.68
ATN1P54259 BASP1P1-201ENST00000430708 665 ntBASIC19.28■□□□□ 0.68
ATN1P54259 DDX43P3-201ENST00000441064 443 ntBASIC19.28■□□□□ 0.68
ATN1P54259 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ATN1P54259 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.28■□□□□ 0.68
ATN1P54259 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.28■□□□□ 0.68
ATN1P54259 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC19.28■□□□□ 0.68
ATN1P54259 AC087641.1-201ENST00000557561 1021 ntBASIC19.28■□□□□ 0.68
ATN1P54259 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.28■□□□□ 0.68
ATN1P54259 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.28■□□□□ 0.68
ATN1P54259 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.28■□□□□ 0.68
ATN1P54259 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ATN1P54259 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATN1P54259 AC009336.1-201ENST00000608941 1553 ntBASIC19.27■□□□□ 0.68
ATN1P54259 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.27■□□□□ 0.68
ATN1P54259 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATN1P54259 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.27■□□□□ 0.68
ATN1P54259 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATN1P54259 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.27■□□□□ 0.68
ATN1P54259 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ATN1P54259 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATN1P54259 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATN1P54259 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATN1P54259 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATN1P54259 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.27■□□□□ 0.68
ATN1P54259 AC055876.3-201ENST00000431496 288 ntBASIC19.27■□□□□ 0.68
ATN1P54259 ADH5P3-201ENST00000433842 1137 ntBASIC19.27■□□□□ 0.68
ATN1P54259 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.27■□□□□ 0.68
ATN1P54259 TSPY16P-201ENST00000449843 468 ntBASIC19.27■□□□□ 0.68
ATN1P54259 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.27■□□□□ 0.68
ATN1P54259 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.27■□□□□ 0.68
ATN1P54259 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.27■□□□□ 0.68
ATN1P54259 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.27■□□□□ 0.68
ATN1P54259 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.27■□□□□ 0.68
ATN1P54259 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.27■□□□□ 0.68
ATN1P54259 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC19.27■□□□□ 0.68
ATN1P54259 AC005225.4-201ENST00000557330 545 ntBASIC19.27■□□□□ 0.68
ATN1P54259 RN7SL204P-201ENST00000582831 262 ntBASIC19.27■□□□□ 0.68
ATN1P54259 AC015911.4-201ENST00000588022 1070 ntBASIC19.27■□□□□ 0.68
ATN1P54259 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.27■□□□□ 0.68
ATN1P54259 AL391001.1-201ENST00000602747 715 ntBASIC19.27■□□□□ 0.68
ATN1P54259 AC026120.1-201ENST00000611536 926 ntBASIC19.27■□□□□ 0.68
ATN1P54259 AC138649.4-201ENST00000612222 287 ntBASIC19.27■□□□□ 0.68
ATN1P54259 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATN1P54259 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATN1P54259 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATN1P54259 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
ATN1P54259 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATN1P54259 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms