Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LBX1P52954 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.65■□□□□ 0.74
LBX1P52954 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LBX1P52954 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LBX1P52954 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LBX1P52954 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LBX1P52954 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
LBX1P52954 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBX1P52954 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.73
LBX1P52954 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LBX1P52954 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LBX1P52954 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LBX1P52954 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBX1P52954 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.64■□□□□ 0.73
LBX1P52954 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LBX1P52954 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.64■□□□□ 0.73
LBX1P52954 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.64■□□□□ 0.73
LBX1P52954 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
LBX1P52954 AC008267.7-201ENST00000624570 1194 ntBASIC19.64■□□□□ 0.73
LBX1P52954 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC19.64■□□□□ 0.73
LBX1P52954 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.64■□□□□ 0.73
LBX1P52954 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LBX1P52954 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LBX1P52954 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBX1P52954 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.64■□□□□ 0.73
LBX1P52954 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBX1P52954 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
LBX1P52954 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LBX1P52954 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LBX1P52954 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.63■□□□□ 0.73
LBX1P52954 MIR346-201ENST00000362234 95 ntBASIC19.63■□□□□ 0.73
LBX1P52954 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC19.63■□□□□ 0.73
LBX1P52954 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC19.63■□□□□ 0.73
LBX1P52954 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.63■□□□□ 0.73
LBX1P52954 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 AC087163.2-201ENST00000457299 853 ntBASIC19.63■□□□□ 0.73
LBX1P52954 HLA-V-204ENST00000476601 1289 ntBASIC19.63■□□□□ 0.73
LBX1P52954 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.63■□□□□ 0.73
LBX1P52954 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.63■□□□□ 0.73
LBX1P52954 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC19.63■□□□□ 0.73
LBX1P52954 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
LBX1P52954 MIR4515-201ENST00000584082 81 ntBASIC19.63■□□□□ 0.73
LBX1P52954 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
LBX1P52954 AC027307.2-201ENST00000591252 911 ntBASIC19.63■□□□□ 0.73
LBX1P52954 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LBX1P52954 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LBX1P52954 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
LBX1P52954 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.63■□□□□ 0.73
LBX1P52954 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
LBX1P52954 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBX1P52954 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBX1P52954 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.62■□□□□ 0.73
LBX1P52954 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBX1P52954 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBX1P52954 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LBX1P52954 TMEM14DP-201ENST00000422205 345 ntBASIC19.62■□□□□ 0.73
LBX1P52954 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC19.62■□□□□ 0.73
LBX1P52954 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LBX1P52954 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.62■□□□□ 0.73
LBX1P52954 AC099548.2-209ENST00000480264 625 ntBASIC19.62■□□□□ 0.73
LBX1P52954 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.62■□□□□ 0.73
LBX1P52954 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC19.62■□□□□ 0.73
LBX1P52954 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.62■□□□□ 0.73
LBX1P52954 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
LBX1P52954 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LBX1P52954 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.62■□□□□ 0.73
LBX1P52954 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.62■□□□□ 0.73
LBX1P52954 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBX1P52954 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBX1P52954 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBX1P52954 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LBX1P52954 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.62■□□□□ 0.73
LBX1P52954 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LBX1P52954 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 AC092667.1-201ENST00000434301 2586 ntBASIC19.61■□□□□ 0.73
LBX1P52954 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LBX1P52954 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 AC112907.3-201ENST00000577781 2400 ntBASIC19.61■□□□□ 0.73
LBX1P52954 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
LBX1P52954 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.61■□□□□ 0.73
LBX1P52954 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC19.61■□□□□ 0.73
LBX1P52954 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LBX1P52954 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.61■□□□□ 0.73
LBX1P52954 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms