Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HCFC1P51610 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HCFC1P51610 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1P51610 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HCFC1P51610 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HCFC1P51610 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.25■□□□□ 0.03
HCFC1P51610 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1P51610 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1P51610 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
HCFC1P51610 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1P51610 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC1P51610 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1P51610 SIGLEC30P-201ENST00000455569 941 ntBASIC15.25■□□□□ 0.03
HCFC1P51610 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC1P51610 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1P51610 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1P51610 AC007064.4-201ENST00000637740 555 ntBASIC15.25■□□□□ 0.03
HCFC1P51610 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HCFC1P51610 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1P51610 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HCFC1P51610 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
HCFC1P51610 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.24■□□□□ 0.03
HCFC1P51610 AL590787.1-201ENST00000568856 1315 ntBASIC15.24■□□□□ 0.03
HCFC1P51610 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 AL139400.1-201ENST00000366220 510 ntBASIC15.24■□□□□ 0.03
HCFC1P51610 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC1P51610 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC1P51610 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.24■□□□□ 0.03
HCFC1P51610 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC1P51610 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC1P51610 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.24■□□□□ 0.03
HCFC1P51610 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.24■□□□□ 0.03
HCFC1P51610 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC1P51610 AL096865.1-201ENST00000606796 927 ntBASIC15.24■□□□□ 0.03
HCFC1P51610 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 AC092902.6-201ENST00000641783 218 ntBASIC15.24■□□□□ 0.03
HCFC1P51610 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC1P51610 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC1P51610 BICD1-207ENST00000551848 1962 ntBASIC15.24■□□□□ 0.03
HCFC1P51610 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
HCFC1P51610 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.24■□□□□ 0.03
HCFC1P51610 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.24■□□□□ 0.03
HCFC1P51610 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.24■□□□□ 0.03
HCFC1P51610 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC1P51610 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.24■□□□□ 0.03
HCFC1P51610 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.24■□□□□ 0.03
HCFC1P51610 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
HCFC1P51610 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC1P51610 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC1P51610 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
HCFC1P51610 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC1P51610 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1P51610 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC1P51610 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC1P51610 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1P51610 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 AC009336.1-201ENST00000608941 1553 ntBASIC15.23■□□□□ 0.03
HCFC1P51610 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HCFC1P51610 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC15.23■□□□□ 0.03
HCFC1P51610 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms