Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.53■□□□□ 0.88
MRE11P49959 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MRE11P49959 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MRE11P49959 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRE11P49959 AC068418.2-201ENST00000577309 3703 ntBASIC20.52■□□□□ 0.88
MRE11P49959 MYB-242ENST00000618728 3545 ntTSL 5 BASIC20.52■□□□□ 0.88
MRE11P49959 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MRE11P49959 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRE11P49959 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.52■□□□□ 0.88
MRE11P49959 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MRE11P49959 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MRE11P49959 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
MRE11P49959 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MRE11P49959 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.52■□□□□ 0.88
MRE11P49959 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.52■□□□□ 0.88
MRE11P49959 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.52■□□□□ 0.88
MRE11P49959 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MRE11P49959 AK4P3-201ENST00000418260 669 ntBASIC20.52■□□□□ 0.88
MRE11P49959 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.52■□□□□ 0.88
MRE11P49959 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.52■□□□□ 0.88
MRE11P49959 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.52■□□□□ 0.88
MRE11P49959 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.52■□□□□ 0.88
MRE11P49959 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
MRE11P49959 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MRE11P49959 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MRE11P49959 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
MRE11P49959 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MRE11P49959 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MRE11P49959 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.52■□□□□ 0.87
MRE11P49959 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
MRE11P49959 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MRE11P49959 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
MRE11P49959 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
MRE11P49959 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.52■□□□□ 0.87
MRE11P49959 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MRE11P49959 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
MRE11P49959 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.52■□□□□ 0.87
MRE11P49959 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.52■□□□□ 0.87
MRE11P49959 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MRE11P49959 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.51■□□□□ 0.87
MRE11P49959 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.51■□□□□ 0.87
MRE11P49959 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.51■□□□□ 0.87
MRE11P49959 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MRE11P49959 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MRE11P49959 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MRE11P49959 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 AC246785.2-201ENST00000432512 513 ntBASIC20.51■□□□□ 0.87
MRE11P49959 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.51■□□□□ 0.87
MRE11P49959 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MRE11P49959 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.51■□□□□ 0.87
MRE11P49959 AC093458.2-201ENST00000623150 629 ntBASIC20.51■□□□□ 0.87
MRE11P49959 AC007950.2-201ENST00000615045 2347 ntBASIC20.51■□□□□ 0.87
MRE11P49959 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MRE11P49959 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 AC060834.1-201ENST00000443027 2032 ntBASIC20.51■□□□□ 0.87
MRE11P49959 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MRE11P49959 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
MRE11P49959 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.51■□□□□ 0.87
MRE11P49959 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.51■□□□□ 0.87
MRE11P49959 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MRE11P49959 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MRE11P49959 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MRE11P49959 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
MRE11P49959 RCC2P3-201ENST00000418112 1537 ntBASIC20.5■□□□□ 0.87
MRE11P49959 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 AC092850.2-201ENST00000623821 2697 ntBASIC20.5■□□□□ 0.87
MRE11P49959 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.5■□□□□ 0.87
MRE11P49959 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 AC063952.2-201ENST00000498792 1227 ntBASIC20.5■□□□□ 0.87
MRE11P49959 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.5■□□□□ 0.87
MRE11P49959 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.5■□□□□ 0.87
MRE11P49959 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.5■□□□□ 0.87
MRE11P49959 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC20.5■□□□□ 0.87
MRE11P49959 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MRE11P49959 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms