Protein–RNA interactions for Protein: P49760

CLK2, Dual specificity protein kinase CLK2, humanhuman

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P49760 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLK2P49760 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
CLK2P49760 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.86■□□□□ 0.77
CLK2P49760 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.86■□□□□ 0.77
CLK2P49760 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.85■□□□□ 0.77
CLK2P49760 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.85■□□□□ 0.77
CLK2P49760 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.85■□□□□ 0.77
CLK2P49760 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLK2P49760 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.85■□□□□ 0.77
CLK2P49760 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
CLK2P49760 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLK2P49760 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLK2P49760 NCF1C-201ENST00000438382 1427 ntBASIC19.85■□□□□ 0.77
CLK2P49760 AC097637.2-201ENST00000624096 1997 ntBASIC19.84■□□□□ 0.77
CLK2P49760 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK2P49760 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CLK2P49760 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK2P49760 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.84■□□□□ 0.77
CLK2P49760 AC073621.1-201ENST00000392730 636 ntBASIC19.84■□□□□ 0.77
CLK2P49760 ACTG1P4-201ENST00000425123 1122 ntBASIC19.84■□□□□ 0.77
CLK2P49760 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.84■□□□□ 0.77
CLK2P49760 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.84■□□□□ 0.77
CLK2P49760 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.84■□□□□ 0.77
CLK2P49760 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.84■□□□□ 0.77
CLK2P49760 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.84■□□□□ 0.77
CLK2P49760 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.84■□□□□ 0.77
CLK2P49760 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK2P49760 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.84■□□□□ 0.77
CLK2P49760 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLK2P49760 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.84■□□□□ 0.77
CLK2P49760 AC008735.5-201ENST00000623544 497 ntBASIC19.84■□□□□ 0.77
CLK2P49760 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.84■□□□□ 0.77
CLK2P49760 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CLK2P49760 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLK2P49760 AC243591.1-201ENST00000452967 1364 ntBASIC19.83■□□□□ 0.77
CLK2P49760 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLK2P49760 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.77
CLK2P49760 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK2P49760 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK2P49760 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLK2P49760 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLK2P49760 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK2P49760 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLK2P49760 LINC00982-205ENST00000420957 435 ntBASIC19.83■□□□□ 0.77
CLK2P49760 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CLK2P49760 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.83■□□□□ 0.77
CLK2P49760 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.83■□□□□ 0.77
CLK2P49760 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLK2P49760 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.83■□□□□ 0.77
CLK2P49760 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.83■□□□□ 0.77
CLK2P49760 AC139887.3-201ENST00000568585 713 ntBASIC19.83■□□□□ 0.77
CLK2P49760 AL353135.1-201ENST00000606729 504 ntBASIC19.83■□□□□ 0.77
CLK2P49760 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLK2P49760 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.83■□□□□ 0.76
CLK2P49760 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK2P49760 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.83■□□□□ 0.76
CLK2P49760 PP12613-201ENST00000424958 2230 ntBASIC19.83■□□□□ 0.76
CLK2P49760 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.83■□□□□ 0.76
CLK2P49760 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.83■□□□□ 0.76
CLK2P49760 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLK2P49760 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLK2P49760 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CLK2P49760 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.82■□□□□ 0.76
CLK2P49760 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLK2P49760 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK2P49760 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLK2P49760 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLK2P49760 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.82■□□□□ 0.76
CLK2P49760 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.82■□□□□ 0.76
CLK2P49760 SLC25A1P3-201ENST00000395415 828 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms