Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TNNI2P48788 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI2P48788 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.81■□□□□ 0.92
TNNI2P48788 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI2P48788 AP002414.1-201ENST00000391405 1147 ntBASIC20.81■□□□□ 0.92
TNNI2P48788 CNN2P11-201ENST00000429351 262 ntBASIC20.81■□□□□ 0.92
TNNI2P48788 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.81■□□□□ 0.92
TNNI2P48788 CEND1P1-201ENST00000451006 455 ntBASIC20.81■□□□□ 0.92
TNNI2P48788 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.81■□□□□ 0.92
TNNI2P48788 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.81■□□□□ 0.92
TNNI2P48788 AL078644.1-201ENST00000609881 752 ntBASIC20.81■□□□□ 0.92
TNNI2P48788 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI2P48788 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI2P48788 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI2P48788 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI2P48788 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI2P48788 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TNNI2P48788 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.81■□□□□ 0.92
TNNI2P48788 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI2P48788 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNNI2P48788 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.8■□□□□ 0.92
TNNI2P48788 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TNNI2P48788 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.8■□□□□ 0.92
TNNI2P48788 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
TNNI2P48788 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.8■□□□□ 0.92
TNNI2P48788 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.8■□□□□ 0.92
TNNI2P48788 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 PTCHD3P3-201ENST00000403073 906 ntBASIC20.8■□□□□ 0.92
TNNI2P48788 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.8■□□□□ 0.92
TNNI2P48788 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.8■□□□□ 0.92
TNNI2P48788 AC096734.2-201ENST00000562054 433 ntBASIC20.8■□□□□ 0.92
TNNI2P48788 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.8■□□□□ 0.92
TNNI2P48788 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TNNI2P48788 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.8■□□□□ 0.92
TNNI2P48788 AC009336.1-201ENST00000608941 1553 ntBASIC20.8■□□□□ 0.92
TNNI2P48788 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.8■□□□□ 0.92
TNNI2P48788 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TNNI2P48788 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.79■□□□□ 0.92
TNNI2P48788 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
TNNI2P48788 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.79■□□□□ 0.92
TNNI2P48788 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
TNNI2P48788 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 IGLL3P-201ENST00000412472 434 ntBASIC20.79■□□□□ 0.92
TNNI2P48788 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.79■□□□□ 0.92
TNNI2P48788 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC20.79■□□□□ 0.92
TNNI2P48788 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.79■□□□□ 0.92
TNNI2P48788 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 PDPK2P-202ENST00000562415 1191 ntBASIC20.79■□□□□ 0.92
TNNI2P48788 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.79■□□□□ 0.92
TNNI2P48788 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.79■□□□□ 0.92
TNNI2P48788 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC20.79■□□□□ 0.92
TNNI2P48788 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
TNNI2P48788 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TNNI2P48788 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TNNI2P48788 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.79■□□□□ 0.92
TNNI2P48788 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TNNI2P48788 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TNNI2P48788 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI2P48788 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TNNI2P48788 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.78■□□□□ 0.92
TNNI2P48788 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.78■□□□□ 0.92
TNNI2P48788 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.78■□□□□ 0.92
TNNI2P48788 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.78■□□□□ 0.92
TNNI2P48788 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TNNI2P48788 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 MYCLP1-201ENST00000372451 1075 ntBASIC20.78■□□□□ 0.92
TNNI2P48788 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI2P48788 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TNNI2P48788 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TNNI2P48788 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms