Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 MRPL3P1-201ENST00000400109 1033 ntBASIC17.6■□□□□ 0.41
CSNK1DP48730 ACTG1P4-201ENST00000425123 1122 ntBASIC17.6■□□□□ 0.41
CSNK1DP48730 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.6■□□□□ 0.41
CSNK1DP48730 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.6■□□□□ 0.41
CSNK1DP48730 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.6■□□□□ 0.41
CSNK1DP48730 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CSNK1DP48730 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.6■□□□□ 0.41
CSNK1DP48730 AC107918.4-202ENST00000641623 219 ntBASIC17.6■□□□□ 0.41
CSNK1DP48730 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.6■□□□□ 0.41
CSNK1DP48730 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1DP48730 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1DP48730 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1DP48730 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1DP48730 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1DP48730 AC004817.3-201ENST00000602957 2129 ntBASIC17.6■□□□□ 0.41
CSNK1DP48730 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
CSNK1DP48730 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1DP48730 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CSNK1DP48730 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1DP48730 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CSNK1DP48730 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1DP48730 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CSNK1DP48730 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1DP48730 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1DP48730 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CSNK1DP48730 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1DP48730 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.59■□□□□ 0.41
CSNK1DP48730 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.59■□□□□ 0.41
CSNK1DP48730 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1DP48730 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.59■□□□□ 0.41
CSNK1DP48730 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 AC016396.2-201ENST00000562575 1417 ntBASIC17.59■□□□□ 0.41
CSNK1DP48730 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.59■□□□□ 0.41
CSNK1DP48730 LAGE3P1-201ENST00000425356 484 ntBASIC17.59■□□□□ 0.41
CSNK1DP48730 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.59■□□□□ 0.41
CSNK1DP48730 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1DP48730 AC139887.3-201ENST00000568585 713 ntBASIC17.59■□□□□ 0.41
CSNK1DP48730 AC148477.8-201ENST00000624298 468 ntBASIC17.59■□□□□ 0.41
CSNK1DP48730 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 AC018470.1-201ENST00000624790 3129 ntBASIC17.59■□□□□ 0.41
CSNK1DP48730 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.59■□□□□ 0.41
CSNK1DP48730 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.59■□□□□ 0.41
CSNK1DP48730 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CSNK1DP48730 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSNK1DP48730 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CSNK1DP48730 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSNK1DP48730 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
CSNK1DP48730 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CSNK1DP48730 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CSNK1DP48730 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.58■□□□□ 0.41
CSNK1DP48730 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.58■□□□□ 0.41
CSNK1DP48730 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.58■□□□□ 0.41
CSNK1DP48730 NCF1C-201ENST00000438382 1427 ntBASIC17.58■□□□□ 0.41
CSNK1DP48730 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1DP48730 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1DP48730 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CSNK1DP48730 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1DP48730 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1DP48730 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CSNK1DP48730 AL031284.1-201ENST00000419297 478 ntBASIC17.58■□□□□ 0.4
CSNK1DP48730 HNRNPDP1-201ENST00000439535 754 ntBASIC17.58■□□□□ 0.4
CSNK1DP48730 RNA5SP419-201ENST00000515908 135 ntBASIC17.58■□□□□ 0.4
CSNK1DP48730 OR7E14P-202ENST00000530490 1290 ntBASIC17.58■□□□□ 0.4
CSNK1DP48730 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.58■□□□□ 0.4
CSNK1DP48730 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.58■□□□□ 0.4
CSNK1DP48730 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1DP48730 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1DP48730 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1DP48730 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1DP48730 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CSNK1DP48730 AL135999.2-201ENST00000622438 1686 ntBASIC17.58■□□□□ 0.4
CSNK1DP48730 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1DP48730 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CSNK1DP48730 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.57■□□□□ 0.4
CSNK1DP48730 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1DP48730 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CSNK1DP48730 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1DP48730 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1DP48730 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CSNK1DP48730 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CSNK1DP48730 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1DP48730 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CSNK1DP48730 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1DP48730 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CSNK1DP48730 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.57■□□□□ 0.4
CSNK1DP48730 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms