Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.2■□□□□ 0.18
SLC1A3P43003 AC090616.6-201ENST00000582640 721 ntBASIC16.2■□□□□ 0.18
SLC1A3P43003 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC1A3P43003 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
SLC1A3P43003 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SLC1A3P43003 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC1A3P43003 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SLC1A3P43003 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC1A3P43003 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC1A3P43003 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
SLC1A3P43003 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SLC1A3P43003 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC1A3P43003 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 ARMC10P1-201ENST00000313754 855 ntBASIC16.19■□□□□ 0.18
SLC1A3P43003 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC1A3P43003 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC1A3P43003 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
SLC1A3P43003 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.19■□□□□ 0.18
SLC1A3P43003 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC1A3P43003 FAM86EP-206ENST00000510506 987 ntBASIC16.19■□□□□ 0.18
SLC1A3P43003 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 KRT8P26-201ENST00000534154 1276 ntBASIC16.19■□□□□ 0.18
SLC1A3P43003 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC1A3P43003 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC1A3P43003 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC1A3P43003 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC1A3P43003 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC1A3P43003 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 AC011676.5-201ENST00000624864 2660 ntBASIC16.19■□□□□ 0.18
SLC1A3P43003 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC1A3P43003 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC1A3P43003 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC1A3P43003 AC005332.1-201ENST00000577698 1310 ntBASIC16.19■□□□□ 0.18
SLC1A3P43003 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC1A3P43003 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC1A3P43003 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC1A3P43003 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SLC1A3P43003 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
SLC1A3P43003 AC133963.1-201ENST00000504166 1679 ntBASIC16.18■□□□□ 0.18
SLC1A3P43003 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SLC1A3P43003 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC1A3P43003 TNRC18P3-201ENST00000441896 2691 ntBASIC16.18■□□□□ 0.18
SLC1A3P43003 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC1A3P43003 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC1A3P43003 RN7SL606P-201ENST00000472779 293 ntBASIC16.18■□□□□ 0.18
SLC1A3P43003 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC1A3P43003 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLC1A3P43003 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC1A3P43003 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 AC087388.1-201ENST00000571370 1112 ntBASIC16.18■□□□□ 0.18
SLC1A3P43003 AL445228.2-201ENST00000605589 952 ntBASIC16.18■□□□□ 0.18
SLC1A3P43003 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
SLC1A3P43003 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC1A3P43003 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
SLC1A3P43003 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC1A3P43003 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLC1A3P43003 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms