Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CDKN2CP42773 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2CP42773 AC016396.2-201ENST00000562575 1417 ntBASIC16.63■□□□□ 0.25
CDKN2CP42773 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CDKN2CP42773 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDKN2CP42773 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKN2CP42773 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKN2CP42773 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKN2CP42773 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.63■□□□□ 0.25
CDKN2CP42773 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.63■□□□□ 0.25
CDKN2CP42773 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2CP42773 GPR32P1-201ENST00000601788 811 ntBASIC16.63■□□□□ 0.25
CDKN2CP42773 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2CP42773 AC005363.2-201ENST00000618631 242 ntBASIC16.63■□□□□ 0.25
CDKN2CP42773 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
CDKN2CP42773 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.63■□□□□ 0.25
CDKN2CP42773 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2CP42773 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.63■□□□□ 0.25
CDKN2CP42773 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDKN2CP42773 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CDKN2CP42773 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 AC116353.5-201ENST00000638148 1699 ntBASIC16.62■□□□□ 0.25
CDKN2CP42773 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKN2CP42773 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.62■□□□□ 0.25
CDKN2CP42773 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.62■□□□□ 0.25
CDKN2CP42773 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKN2CP42773 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 HBZP1-201ENST00000354915 429 ntBASIC16.62■□□□□ 0.25
CDKN2CP42773 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKN2CP42773 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.62■□□□□ 0.25
CDKN2CP42773 AGGF1P2-201ENST00000426656 2106 ntBASIC16.62■□□□□ 0.25
CDKN2CP42773 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.62■□□□□ 0.25
CDKN2CP42773 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CDKN2CP42773 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.62■□□□□ 0.25
CDKN2CP42773 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKN2CP42773 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 AC097493.4-201ENST00000641197 219 ntBASIC16.62■□□□□ 0.25
CDKN2CP42773 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.62■□□□□ 0.25
CDKN2CP42773 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CDKN2CP42773 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.62■□□□□ 0.25
CDKN2CP42773 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDKN2CP42773 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKN2CP42773 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.61■□□□□ 0.25
CDKN2CP42773 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKN2CP42773 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.61■□□□□ 0.25
CDKN2CP42773 AC010460.3-201ENST00000511359 1579 ntBASIC16.61■□□□□ 0.25
CDKN2CP42773 TNRC18P3-201ENST00000441896 2691 ntBASIC16.61■□□□□ 0.25
CDKN2CP42773 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKN2CP42773 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKN2CP42773 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKN2CP42773 AC005521.1-201ENST00000393351 872 ntBASIC16.61■□□□□ 0.25
CDKN2CP42773 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.61■□□□□ 0.25
CDKN2CP42773 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 AL359075.1-203ENST00000462729 1002 ntBASIC16.61■□□□□ 0.25
CDKN2CP42773 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDKN2CP42773 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.61■□□□□ 0.25
CDKN2CP42773 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.61■□□□□ 0.25
CDKN2CP42773 AC005332.3-201ENST00000589904 676 ntBASIC16.61■□□□□ 0.25
CDKN2CP42773 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms