Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 AC008764.6-201ENST00000595909 2069 ntBASIC14.38□□□□□ -0.11
CEACAM3P40198 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CEACAM3P40198 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.38□□□□□ -0.11
CEACAM3P40198 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.37□□□□□ -0.11
CEACAM3P40198 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CEACAM3P40198 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM3P40198 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
CEACAM3P40198 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CEACAM3P40198 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.37□□□□□ -0.11
CEACAM3P40198 AC122714.2-201ENST00000502787 707 ntBASIC14.37□□□□□ -0.11
CEACAM3P40198 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.37□□□□□ -0.11
CEACAM3P40198 AC096582.2-201ENST00000510860 516 ntBASIC14.37□□□□□ -0.11
CEACAM3P40198 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.37□□□□□ -0.11
CEACAM3P40198 PRELID1P1-202ENST00000567272 903 ntBASIC14.37□□□□□ -0.11
CEACAM3P40198 AC005336.2-201ENST00000593183 939 ntBASIC14.37□□□□□ -0.11
CEACAM3P40198 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CEACAM3P40198 AC099336.1-202ENST00000602961 463 ntBASIC14.37□□□□□ -0.11
CEACAM3P40198 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CEACAM3P40198 LINC01451-201ENST00000623792 534 ntBASIC14.37□□□□□ -0.11
CEACAM3P40198 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.37□□□□□ -0.11
CEACAM3P40198 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.37□□□□□ -0.11
CEACAM3P40198 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM3P40198 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.37□□□□□ -0.11
CEACAM3P40198 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CEACAM3P40198 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CEACAM3P40198 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM3P40198 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM3P40198 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.37□□□□□ -0.11
CEACAM3P40198 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CEACAM3P40198 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CEACAM3P40198 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CEACAM3P40198 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM3P40198 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CEACAM3P40198 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM3P40198 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.36□□□□□ -0.11
CEACAM3P40198 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM3P40198 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CEACAM3P40198 COX5BP2-201ENST00000392354 334 ntBASIC14.36□□□□□ -0.11
CEACAM3P40198 IGHV3-47-201ENST00000425060 335 ntBASIC14.36□□□□□ -0.11
CEACAM3P40198 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.36□□□□□ -0.11
CEACAM3P40198 AC007967.3-201ENST00000434308 558 ntBASIC14.36□□□□□ -0.11
CEACAM3P40198 NUS1P1-201ENST00000446295 882 ntBASIC14.36□□□□□ -0.11
CEACAM3P40198 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CEACAM3P40198 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM3P40198 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.36□□□□□ -0.11
CEACAM3P40198 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.36□□□□□ -0.11
CEACAM3P40198 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.36□□□□□ -0.11
CEACAM3P40198 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 AL121772.3-201ENST00000610840 674 ntBASIC14.36□□□□□ -0.11
CEACAM3P40198 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.36□□□□□ -0.11
CEACAM3P40198 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.36□□□□□ -0.11
CEACAM3P40198 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CEACAM3P40198 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CEACAM3P40198 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM3P40198 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.36□□□□□ -0.11
CEACAM3P40198 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CEACAM3P40198 TP73-AS1-210ENST00000637775 1455 ntBASIC14.36□□□□□ -0.11
CEACAM3P40198 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CEACAM3P40198 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CEACAM3P40198 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CEACAM3P40198 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms