Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
GDNFP39905 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
GDNFP39905 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 TSPY14P-201ENST00000303979 915 ntBASIC15.34■□□□□ 0.05
GDNFP39905 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 TSPY17P-201ENST00000450329 467 ntBASIC15.34■□□□□ 0.05
GDNFP39905 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.34■□□□□ 0.05
GDNFP39905 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 NAPSB-206ENST00000562112 1266 ntBASIC15.34■□□□□ 0.05
GDNFP39905 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.34■□□□□ 0.05
GDNFP39905 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 PCDHA1-201ENST00000378133 2726 ntBASIC15.34■□□□□ 0.05
GDNFP39905 LINC02199-201ENST00000506655 2702 ntBASIC15.34■□□□□ 0.05
GDNFP39905 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.34■□□□□ 0.05
GDNFP39905 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.34■□□□□ 0.05
GDNFP39905 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GDNFP39905 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GDNFP39905 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.33■□□□□ 0.05
GDNFP39905 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.05
GDNFP39905 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
GDNFP39905 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.33■□□□□ 0.04
GDNFP39905 LINC01126-201ENST00000623515 1646 ntBASIC15.33■□□□□ 0.04
GDNFP39905 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GDNFP39905 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
GDNFP39905 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
GDNFP39905 CCR12P-201ENST00000446203 998 ntBASIC15.33■□□□□ 0.04
GDNFP39905 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.33■□□□□ 0.04
GDNFP39905 EGLN1P1-201ENST00000531623 762 ntBASIC15.33■□□□□ 0.04
GDNFP39905 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.33■□□□□ 0.04
GDNFP39905 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.33■□□□□ 0.04
GDNFP39905 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
GDNFP39905 AC116562.4-202ENST00000641738 218 ntBASIC15.33■□□□□ 0.04
GDNFP39905 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
GDNFP39905 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
GDNFP39905 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
GDNFP39905 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.33■□□□□ 0.04
GDNFP39905 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.33■□□□□ 0.04
GDNFP39905 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
GDNFP39905 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
GDNFP39905 AC060834.1-201ENST00000443027 2032 ntBASIC15.33■□□□□ 0.04
GDNFP39905 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.33■□□□□ 0.04
GDNFP39905 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.32■□□□□ 0.04
GDNFP39905 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.32■□□□□ 0.04
GDNFP39905 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 AC087499.1-201ENST00000418141 1075 ntBASIC15.32■□□□□ 0.04
GDNFP39905 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.32■□□□□ 0.04
GDNFP39905 ECEL1P2-202ENST00000465689 757 ntBASIC15.32■□□□□ 0.04
GDNFP39905 MIR3180-5-201ENST00000583743 153 ntBASIC15.32■□□□□ 0.04
GDNFP39905 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 CR769767.2-201ENST00000622735 460 ntBASIC15.32■□□□□ 0.04
GDNFP39905 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 AL356309.3-201ENST00000624132 1934 ntBASIC15.32■□□□□ 0.04
GDNFP39905 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
GDNFP39905 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
GDNFP39905 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms