Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.8■□□□□ 0.44
RPA3P35244 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.8■□□□□ 0.44
RPA3P35244 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPA3P35244 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.8■□□□□ 0.44
RPA3P35244 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RPA3P35244 AL139384.1-201ENST00000612143 3047 ntBASIC17.8■□□□□ 0.44
RPA3P35244 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RPA3P35244 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RPA3P35244 AC060834.1-201ENST00000443027 2032 ntBASIC17.79■□□□□ 0.44
RPA3P35244 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RPA3P35244 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.79■□□□□ 0.44
RPA3P35244 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.79■□□□□ 0.44
RPA3P35244 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
RPA3P35244 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.79■□□□□ 0.44
RPA3P35244 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.79■□□□□ 0.44
RPA3P35244 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RPA3P35244 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RPA3P35244 RASA4DP-201ENST00000460726 1199 ntBASIC17.79■□□□□ 0.44
RPA3P35244 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.79■□□□□ 0.44
RPA3P35244 AL049597.2-201ENST00000565575 961 ntBASIC17.79■□□□□ 0.44
RPA3P35244 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.79■□□□□ 0.44
RPA3P35244 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.79■□□□□ 0.44
RPA3P35244 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RPA3P35244 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RPA3P35244 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 LINC00167-201ENST00000530583 1419 ntBASIC17.79■□□□□ 0.44
RPA3P35244 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.79■□□□□ 0.44
RPA3P35244 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.79■□□□□ 0.44
RPA3P35244 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RPA3P35244 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPA3P35244 AC008894.3-201ENST00000624324 3103 ntBASIC17.78■□□□□ 0.44
RPA3P35244 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RPA3P35244 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RPA3P35244 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.78■□□□□ 0.44
RPA3P35244 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
RPA3P35244 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 STARP1-201ENST00000397973 869 ntBASIC17.78■□□□□ 0.44
RPA3P35244 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RPA3P35244 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.78■□□□□ 0.44
RPA3P35244 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
RPA3P35244 AL359075.1-203ENST00000462729 1002 ntBASIC17.78■□□□□ 0.44
RPA3P35244 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.78■□□□□ 0.44
RPA3P35244 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.78■□□□□ 0.44
RPA3P35244 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.78■□□□□ 0.44
RPA3P35244 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.78■□□□□ 0.44
RPA3P35244 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
RPA3P35244 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RPA3P35244 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RPA3P35244 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.78■□□□□ 0.44
RPA3P35244 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RPA3P35244 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RPA3P35244 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RPA3P35244 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RPA3P35244 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.78■□□□□ 0.44
RPA3P35244 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPA3P35244 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.77■□□□□ 0.44
RPA3P35244 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RPA3P35244 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RPA3P35244 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.77■□□□□ 0.44
RPA3P35244 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPA3P35244 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPA3P35244 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
RPA3P35244 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RPA3P35244 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.77■□□□□ 0.44
RPA3P35244 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RPA3P35244 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RPA3P35244 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms