Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL8A2P25067 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL8A2P25067 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.86□□□□□ -0.03
COL8A2P25067 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.86□□□□□ -0.03
COL8A2P25067 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.86□□□□□ -0.03
COL8A2P25067 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.86□□□□□ -0.03
COL8A2P25067 OR7E14P-202ENST00000530490 1290 ntBASIC14.86□□□□□ -0.03
COL8A2P25067 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.86□□□□□ -0.03
COL8A2P25067 AC139887.3-201ENST00000568585 713 ntBASIC14.86□□□□□ -0.03
COL8A2P25067 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.86□□□□□ -0.03
COL8A2P25067 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.86□□□□□ -0.03
COL8A2P25067 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.86□□□□□ -0.03
COL8A2P25067 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
COL8A2P25067 AL139288.1-201ENST00000623748 933 ntBASIC14.86□□□□□ -0.03
COL8A2P25067 AC116407.3-201ENST00000623905 1129 ntBASIC14.86□□□□□ -0.03
COL8A2P25067 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL8A2P25067 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
COL8A2P25067 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
COL8A2P25067 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
COL8A2P25067 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL8A2P25067 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.85□□□□□ -0.03
COL8A2P25067 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
COL8A2P25067 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 AC079776.2-201ENST00000641154 1609 ntBASIC14.85□□□□□ -0.03
COL8A2P25067 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
COL8A2P25067 RAB17-203ENST00000409576 466 ntTSL 3 BASIC14.85□□□□□ -0.03
COL8A2P25067 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.85□□□□□ -0.03
COL8A2P25067 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
COL8A2P25067 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 AC025062.2-201ENST00000605477 670 ntBASIC14.85□□□□□ -0.03
COL8A2P25067 MIR7706-201ENST00000613747 67 ntBASIC14.85□□□□□ -0.03
COL8A2P25067 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.85□□□□□ -0.03
COL8A2P25067 AC073592.5-201ENST00000624854 528 ntBASIC14.85□□□□□ -0.03
COL8A2P25067 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
COL8A2P25067 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.85□□□□□ -0.03
COL8A2P25067 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
COL8A2P25067 AL049757.1-201ENST00000616842 1596 ntBASIC14.85□□□□□ -0.03
COL8A2P25067 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL8A2P25067 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.84□□□□□ -0.03
COL8A2P25067 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.84□□□□□ -0.03
COL8A2P25067 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
COL8A2P25067 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
COL8A2P25067 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
COL8A2P25067 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 FLJ13224-201ENST00000313737 1514 ntBASIC14.84□□□□□ -0.03
COL8A2P25067 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.84□□□□□ -0.03
COL8A2P25067 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 SLC25A1P1-201ENST00000528351 927 ntBASIC14.84□□□□□ -0.03
COL8A2P25067 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.84□□□□□ -0.03
COL8A2P25067 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
COL8A2P25067 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL8A2P25067 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.84□□□□□ -0.03
COL8A2P25067 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC14.84□□□□□ -0.03
COL8A2P25067 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms