Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
POLR2CP19387 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2CP19387 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2CP19387 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.05■□□□□ 0.32
POLR2CP19387 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2CP19387 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2CP19387 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
POLR2CP19387 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
POLR2CP19387 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2CP19387 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
POLR2CP19387 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2CP19387 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR2CP19387 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
POLR2CP19387 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
POLR2CP19387 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2CP19387 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2CP19387 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.04■□□□□ 0.32
POLR2CP19387 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2CP19387 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2CP19387 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR2CP19387 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.04■□□□□ 0.32
POLR2CP19387 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.04■□□□□ 0.32
POLR2CP19387 AP000867.4-201ENST00000641616 219 ntBASIC17.04■□□□□ 0.32
POLR2CP19387 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
POLR2CP19387 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
POLR2CP19387 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.04■□□□□ 0.32
POLR2CP19387 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
POLR2CP19387 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
POLR2CP19387 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.04■□□□□ 0.32
POLR2CP19387 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
POLR2CP19387 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.03■□□□□ 0.32
POLR2CP19387 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.03■□□□□ 0.32
POLR2CP19387 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
POLR2CP19387 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2CP19387 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
POLR2CP19387 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2CP19387 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
POLR2CP19387 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2CP19387 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.03■□□□□ 0.32
POLR2CP19387 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
POLR2CP19387 SCARNA2-201ENST00000458748 420 ntBASIC17.03■□□□□ 0.32
POLR2CP19387 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
POLR2CP19387 SLC25A6P4-201ENST00000586535 553 ntBASIC17.03■□□□□ 0.32
POLR2CP19387 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.03■□□□□ 0.32
POLR2CP19387 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
POLR2CP19387 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.03■□□□□ 0.32
POLR2CP19387 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.03■□□□□ 0.32
POLR2CP19387 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
POLR2CP19387 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
POLR2CP19387 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
POLR2CP19387 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.03■□□□□ 0.32
POLR2CP19387 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
POLR2CP19387 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
POLR2CP19387 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
POLR2CP19387 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2CP19387 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
POLR2CP19387 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.02■□□□□ 0.32
POLR2CP19387 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2CP19387 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
POLR2CP19387 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2CP19387 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
POLR2CP19387 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.02■□□□□ 0.32
POLR2CP19387 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2CP19387 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2CP19387 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
POLR2CP19387 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2CP19387 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.02■□□□□ 0.32
POLR2CP19387 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2CP19387 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2CP19387 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
POLR2CP19387 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
POLR2CP19387 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms