Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 RN7SL510P-201ENST00000581311 263 ntBASIC17.69■□□□□ 0.42
CTPS1P17812 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CTPS1P17812 LINC00304-203ENST00000565008 1864 ntBASIC17.69■□□□□ 0.42
CTPS1P17812 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CTPS1P17812 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.68■□□□□ 0.42
CTPS1P17812 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTPS1P17812 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.68■□□□□ 0.42
CTPS1P17812 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.68■□□□□ 0.42
CTPS1P17812 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.68■□□□□ 0.42
CTPS1P17812 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CTPS1P17812 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.68■□□□□ 0.42
CTPS1P17812 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CTPS1P17812 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.68■□□□□ 0.42
CTPS1P17812 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 AC103564.2-201ENST00000432853 1299 ntBASIC17.68■□□□□ 0.42
CTPS1P17812 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.68■□□□□ 0.42
CTPS1P17812 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CTPS1P17812 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.68■□□□□ 0.42
CTPS1P17812 AL121894.2-201ENST00000602977 491 ntBASIC17.68■□□□□ 0.42
CTPS1P17812 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.68■□□□□ 0.42
CTPS1P17812 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.68■□□□□ 0.42
CTPS1P17812 AL049757.1-201ENST00000616842 1596 ntBASIC17.68■□□□□ 0.42
CTPS1P17812 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.68■□□□□ 0.42
CTPS1P17812 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CTPS1P17812 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.68■□□□□ 0.42
CTPS1P17812 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTPS1P17812 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CTPS1P17812 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.67■□□□□ 0.42
CTPS1P17812 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS1P17812 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.67■□□□□ 0.42
CTPS1P17812 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.67■□□□□ 0.42
CTPS1P17812 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CTPS1P17812 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.67■□□□□ 0.42
CTPS1P17812 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS1P17812 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS1P17812 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS1P17812 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS1P17812 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.67■□□□□ 0.42
CTPS1P17812 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.67■□□□□ 0.42
CTPS1P17812 ABCD1P5-201ENST00000445663 754 ntBASIC17.67■□□□□ 0.42
CTPS1P17812 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.67■□□□□ 0.42
CTPS1P17812 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CTPS1P17812 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.67■□□□□ 0.42
CTPS1P17812 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS1P17812 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CTPS1P17812 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CTPS1P17812 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CTPS1P17812 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS1P17812 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CTPS1P17812 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.67■□□□□ 0.42
CTPS1P17812 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CTPS1P17812 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CTPS1P17812 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS1P17812 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CTPS1P17812 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CTPS1P17812 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CTPS1P17812 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CTPS1P17812 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CTPS1P17812 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS1P17812 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.66■□□□□ 0.42
CTPS1P17812 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.66■□□□□ 0.42
CTPS1P17812 AF238378.1-201ENST00000526806 358 ntBASIC17.66■□□□□ 0.42
CTPS1P17812 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CTPS1P17812 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.66■□□□□ 0.42
CTPS1P17812 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CTPS1P17812 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS1P17812 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.66■□□□□ 0.42
CTPS1P17812 REXO1L6P-202ENST00000619970 1078 ntBASIC17.66■□□□□ 0.42
CTPS1P17812 AD001527.2-201ENST00000622994 785 ntBASIC17.66■□□□□ 0.42
CTPS1P17812 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.66■□□□□ 0.42
CTPS1P17812 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms