Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.65■□□□□ 0.26
NCK1P16333 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
NCK1P16333 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.65■□□□□ 0.26
NCK1P16333 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCK1P16333 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
NCK1P16333 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NCK1P16333 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NCK1P16333 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NCK1P16333 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
NCK1P16333 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NCK1P16333 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NCK1P16333 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NCK1P16333 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NCK1P16333 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.64■□□□□ 0.25
NCK1P16333 RBM17P1-201ENST00000453646 1190 ntBASIC16.64■□□□□ 0.25
NCK1P16333 AP003071.4-201ENST00000562276 1284 ntBASIC16.64■□□□□ 0.25
NCK1P16333 AC233702.5-201ENST00000584107 538 ntBASIC16.64■□□□□ 0.25
NCK1P16333 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.64■□□□□ 0.25
NCK1P16333 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC16.64■□□□□ 0.25
NCK1P16333 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.64■□□□□ 0.25
NCK1P16333 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
NCK1P16333 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
NCK1P16333 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.64■□□□□ 0.25
NCK1P16333 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.64■□□□□ 0.25
NCK1P16333 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NCK1P16333 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.64■□□□□ 0.25
NCK1P16333 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NCK1P16333 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
NCK1P16333 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
NCK1P16333 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NCK1P16333 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.63■□□□□ 0.25
NCK1P16333 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
NCK1P16333 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.63■□□□□ 0.25
NCK1P16333 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 AC012618.2-201ENST00000428058 849 ntBASIC16.63■□□□□ 0.25
NCK1P16333 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.63■□□□□ 0.25
NCK1P16333 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 AC142381.4-202ENST00000563973 229 ntBASIC16.63■□□□□ 0.25
NCK1P16333 AC008687.5-201ENST00000593746 558 ntBASIC16.63■□□□□ 0.25
NCK1P16333 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
NCK1P16333 AP000525.1-201ENST00000608286 694 ntBASIC16.63■□□□□ 0.25
NCK1P16333 AP001412.1-201ENST00000608405 714 ntBASIC16.63■□□□□ 0.25
NCK1P16333 AC116562.4-202ENST00000641738 218 ntBASIC16.63■□□□□ 0.25
NCK1P16333 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
NCK1P16333 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.63■□□□□ 0.25
NCK1P16333 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NCK1P16333 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.63■□□□□ 0.25
NCK1P16333 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
NCK1P16333 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
NCK1P16333 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NCK1P16333 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
NCK1P16333 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.62■□□□□ 0.25
NCK1P16333 AC116353.5-201ENST00000638148 1699 ntBASIC16.62■□□□□ 0.25
NCK1P16333 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NCK1P16333 LINC02199-201ENST00000506655 2702 ntBASIC16.62■□□□□ 0.25
NCK1P16333 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCK1P16333 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms