Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 NSUN5P1-202ENST00000421140 1535 ntBASIC18.46■□□□□ 0.55
PDGFRAP16234 NSUN5P2-203ENST00000457352 1529 ntBASIC18.46■□□□□ 0.55
PDGFRAP16234 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFRAP16234 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PDGFRAP16234 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PDGFRAP16234 FAM220CP-201ENST00000395253 831 ntBASIC18.46■□□□□ 0.55
PDGFRAP16234 IGHV3-47-201ENST00000425060 335 ntBASIC18.46■□□□□ 0.55
PDGFRAP16234 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.46■□□□□ 0.55
PDGFRAP16234 AC122714.2-201ENST00000502787 707 ntBASIC18.46■□□□□ 0.55
PDGFRAP16234 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.46■□□□□ 0.55
PDGFRAP16234 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFRAP16234 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDGFRAP16234 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFRAP16234 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.46■□□□□ 0.55
PDGFRAP16234 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDGFRAP16234 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PDGFRAP16234 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.46■□□□□ 0.54
PDGFRAP16234 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PDGFRAP16234 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PDGFRAP16234 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PDGFRAP16234 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 SIRPAP1-201ENST00000448467 1770 ntBASIC18.45■□□□□ 0.54
PDGFRAP16234 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.45■□□□□ 0.54
PDGFRAP16234 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 AL450487.1-201ENST00000426799 995 ntBASIC18.45■□□□□ 0.54
PDGFRAP16234 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.45■□□□□ 0.54
PDGFRAP16234 FOSL1P1-201ENST00000511041 816 ntBASIC18.45■□□□□ 0.54
PDGFRAP16234 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.45■□□□□ 0.54
PDGFRAP16234 AC138894.3-201ENST00000603787 634 ntBASIC18.45■□□□□ 0.54
PDGFRAP16234 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
PDGFRAP16234 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDGFRAP16234 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.45■□□□□ 0.54
PDGFRAP16234 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PDGFRAP16234 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 TP73-AS1-210ENST00000637775 1455 ntBASIC18.45■□□□□ 0.54
PDGFRAP16234 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PDGFRAP16234 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFRAP16234 AC141586.5-201ENST00000624546 2050 ntBASIC18.45■□□□□ 0.54
PDGFRAP16234 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDGFRAP16234 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.45■□□□□ 0.54
PDGFRAP16234 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.44■□□□□ 0.54
PDGFRAP16234 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFRAP16234 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDGFRAP16234 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDGFRAP16234 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDGFRAP16234 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFRAP16234 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDGFRAP16234 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFRAP16234 NUS1P1-201ENST00000446295 882 ntBASIC18.44■□□□□ 0.54
PDGFRAP16234 AC002558.1-201ENST00000488906 803 ntBASIC18.44■□□□□ 0.54
PDGFRAP16234 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.44■□□□□ 0.54
PDGFRAP16234 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.44■□□□□ 0.54
PDGFRAP16234 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.44■□□□□ 0.54
PDGFRAP16234 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.44■□□□□ 0.54
PDGFRAP16234 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 AC011467.2-201ENST00000598425 242 ntBASIC18.44■□□□□ 0.54
PDGFRAP16234 AC099336.1-202ENST00000602961 463 ntBASIC18.44■□□□□ 0.54
PDGFRAP16234 AC139713.2-201ENST00000641328 2723 ntBASIC18.44■□□□□ 0.54
PDGFRAP16234 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDGFRAP16234 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PDGFRAP16234 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDGFRAP16234 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms